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  • Top value platform chemicals: bio-based production of organic acids.

    abstract::Driven by the quest for sustainability, recent years have seen a tremendous progress in bio-based production routes from renewable raw materials to commercial goods. Particularly, the production of organic acids has crystallized as a competitive and fast-evolving field, related to the broad applicability of organic ac...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2015.08.022

    authors: Becker J,Lange A,Fabarius J,Wittmann C

    更新日期:2015-12-01 00:00:00

  • Carbohydrate nanotechnology: hierarchical assembly using nature's other information carrying biopolymers.

    abstract::Despite their central role in directing some of the most complex biological processes, carbohydrates--nature's other information carrying biopolymer--have been largely ignored as building blocks for synthetic hierarchical assemblies. The non-stoichiometric binding and astronomical diversity characteristic of carbohydr...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.11.016

    authors: Han X,Zheng Y,Munro CJ,Ji Y,Braunschweig AB

    更新日期:2015-08-01 00:00:00

  • Advances and current limitations in transcript-level control of gene expression.

    abstract::Gene expression control is critical to increase production of recombinant proteins, fine-tune metabolic pathways and reliably express synthetic pathways. The importance of transcriptional control seems to be most important in eukaryotic systems. In this review, we highlight recent developments in the field of transcri...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.12.015

    authors: Leavitt JM,Alper HS

    更新日期:2015-08-01 00:00:00

  • Metabolic pathway compartmentalization: an underappreciated opportunity?

    abstract::For eukaryotic cells to function properly, they divide their intracellular space in subcellular compartments, each harboring specific metabolic activities. In recent years, it has become increasingly clear that compartmentalization of metabolic pathways is a prerequisite for certain cellular functions. This has for in...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.11.022

    authors: Zecchin A,Stapor PC,Goveia J,Carmeliet P

    更新日期:2015-08-01 00:00:00

  • Drinking water microbiology--from measurement to management.

    abstract::New microbial tools enable detailed quantification and characterization of complex drinking water (DW) microbiomes. Many opportunities exist from source to tap to apply this knowledge toward management of the microbiology. This requires consideration of the microbiome continuum across all phases harboring microbes (pl...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.12.014

    authors: Proctor CR,Hammes F

    更新日期:2015-06-01 00:00:00

  • Fungal enzymes for environmental management.

    abstract::Fungal ligninolytic enzymes have broad biotechnological applications. Particularly laccases and certain fungal class II peroxidases from white-rot basidiomycetes are considered in degradation of persistent organic pollutants. Promising processes with reusable immobilized laccases in special reactors have been develope...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2015.03.006

    authors: Kües U

    更新日期:2015-06-01 00:00:00

  • Metabolic engineering of Saccharomyces cerevisiae for production of butanol isomers.

    abstract::Saccharomyces cerevisiae has decisive advantages in industrial processes due to its tolerance to alcohols and fermentation conditions. Butanol isomers are considered as suitable fuel substitutes and valuable biomass-derived chemical building blocks. Whereas high production was achieved with bacterial systems, metaboli...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.09.004

    authors: Generoso WC,Schadeweg V,Oreb M,Boles E

    更新日期:2015-06-01 00:00:00

  • Ethanol production by engineered thermophiles.

    abstract::We compare a number of different strategies that have been pursued to engineer thermophilic microorganisms for increased ethanol production. Ethanol production from pyruvate can proceed via one of four pathways, which are named by the key pyruvate dissimilating enzyme: pyruvate decarboxylase (PDC), pyruvate dehydrogen...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2015.02.006

    authors: Olson DG,Sparling R,Lynd LR

    更新日期:2015-06-01 00:00:00

  • The small intestine microbiota, nutritional modulation and relevance for health.

    abstract::The intestinal microbiota plays a profound role in human health and extensive research has been dedicated to identify microbiota aberrations that are associated with disease. Most of this work has been targeting the large intestine and fecal microbiota, while the small intestine microbiota may also have a profound imp...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.09.005

    authors: El Aidy S,van den Bogert B,Kleerebezem M

    更新日期:2015-04-01 00:00:00

  • Genomic tools to assist breeding for drought tolerance.

    abstract::Water deficit or drought stress is a major limitation to crop production globally. Plant breeders have used a wide range of technologies to successfully breed varieties that perform well under the growth conditions for their target environments but they are always seeking new opportunities to enhance rates of genetic ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.11.027

    authors: Langridge P,Reynolds MP

    更新日期:2015-04-01 00:00:00

  • Plant GSTome: structure and functional role in xenome network and plant stress response.

    abstract::Glutathione transferases (GSTs) represent a major group of detoxification enzymes. All plants possess multiple cytosolic GSTs, each of which displays distinct catalytic as well as non-catalytic binding properties. The progress made in recent years in the fields of genomics, proteomics and protein crystallography of GS...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.12.024

    authors: Labrou NE,Papageorgiou AC,Pavli O,Flemetakis E

    更新日期:2015-04-01 00:00:00

  • Gut brain axis: diet microbiota interactions and implications for modulation of anxiety and depression.

    abstract::The human gut microbiome is composed of an enormous number of microorganisms, generally regarded as commensal bacteria. Without this inherent microbial community, we would be unable to digest plant polysaccharides and would have trouble extracting lipids from our diet. Resident gut bacteria are an important contributo...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.10.007

    authors: Luna RA,Foster JA

    更新日期:2015-04-01 00:00:00

  • Genetically encoded tools for RNA imaging in living cells.

    abstract::RNA imaging probes help us investigate how transport and dynamics of RNA contribute to subcellular RNA localization or regulation of gene expression. Out of the plethora of strategies that have been developed to image RNA in living cells, genetically encoded probes are interesting because they can be produced by the c...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.07.012

    authors: Rath AK,Rentmeister A

    更新日期:2015-02-01 00:00:00

  • Visualizing life with ambient mass spectrometry.

    abstract::Since the development of desorption electrospray ionization (DESI), many other ionization methods for ambient and atmospheric pressure mass spectrometry have been developed. Ambient ionization mass spectrometry has now been used for a wide variety of biological applications, including plant science, microbiology, neur...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.07.005

    authors: Hsu CC,Dorrestein PC

    更新日期:2015-02-01 00:00:00

  • 'Hybrid' processing strategies for expanding and improving the synthesis of renewable bioproducts.

    abstract::The versatile functionality of microbial biocatalysts offers a promising solution to the growing need to replace conventional, petroleum-derived fuels, chemicals, and materials with sustainable alternatives from renewable biomass. Whereas metabolic pathway engineering and strain optimization have greatly expanded the ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.04.005

    authors: Thompson B,Moon TS,Nielsen DR

    更新日期:2014-12-01 00:00:00

  • The genome editing toolbox: a spectrum of approaches for targeted modification.

    abstract::The increase in quality, quantity, and complexity of recombinant products heavily drives the need to predictably engineer model and complex (mammalian) cell systems. However, until recently, limited tools offered the ability to precisely manipulate their genomes, thus impeding the full potential of rational cell line ...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.06.005

    authors: Cheng JK,Alper HS

    更新日期:2014-12-01 00:00:00

  • Towards real-time monitoring of therapeutic protein quality in mammalian cell processes.

    abstract::Protein biopharmaceuticals are mainly produced in mammalian cells which can perform human-like post-translational modifications crucial to protein function. Subject to high variability, these critical quality attributes should be monitored and controlled during the manufacturing process. However, the large time requir...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.06.019

    authors: Pais DA,Carrondo MJ,Alves PM,Teixeira AP

    更新日期:2014-12-01 00:00:00

  • Biopharmaceutical discovery and production in yeast.

    abstract::The selection of an expression platform for recombinant biopharmaceuticals is often centered upon suitable product titers and critical quality attributes, including post-translational modifications. Although notable differences between microbial, yeast, plant, and mammalian host systems exist, recent advances have gre...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.06.007

    authors: Meehl MA,Stadheim TA

    更新日期:2014-12-01 00:00:00

  • Designer microbes for biosynthesis.

    abstract::Microbes have long been adapted for the biosynthetic production of useful compounds. There is increasing demand for the rapid and cheap microbial production of diverse molecules in an industrial setting. Microbes can now be designed and engineered for a particular biosynthetic purpose, thanks to recent developments in...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.02.014

    authors: Quin MB,Schmidt-Dannert C

    更新日期:2014-10-01 00:00:00

  • Technological applications arising from the interactions of DNA bases with metal ions.

    abstract::An intense interest has grown in the unique interactions of nucleic acids with metal ions, which lead to the formation of metal-base pairs and the generation of fluorescent nanomaterials. In this review, different types of metal-base pairs, especially those formed from naturally occurring nucleosides, are described wi...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.10.013

    authors: Park KS,Park HG

    更新日期:2014-08-01 00:00:00

  • The role of anaerobic digestion in the emerging energy economy.

    abstract::Anaerobic digestion is the default process for biological conversion of residue organics to renewable energy and biofuel in the form of methane. However, its scope of application is expanding, due to availability of new technologies, and the emerging drivers of energy and nutrient conservation and recovery. Here, we o...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.01.013

    authors: Batstone DJ,Virdis B

    更新日期:2014-06-01 00:00:00

  • In situ vadose zone bioremediation.

    abstract::Contamination of the vadose zone with various pollutants is a world-wide problem, and often technical or economic constraints impose remediation without excavation. In situ bioremediation in the vadose zone by bioventing has become a standard remediation technology for light spilled petroleum products. In this review,...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.08.018

    authors: Höhener P,Ponsin V

    更新日期:2014-06-01 00:00:00

  • Trash to treasure: production of biofuels and commodity chemicals via syngas fermenting microorganisms.

    abstract::Fermentation of syngas is a means through which unutilized organic waste streams can be converted biologically into biofuels and commodity chemicals. Despite recent advances, several issues remain which limit implementation of industrial-scale syngas fermentation processes. At the cellular level, the energy conservati...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.12.001

    authors: Latif H,Zeidan AA,Nielsen AT,Zengler K

    更新日期:2014-06-01 00:00:00

  • Bioactive fungal polysaccharides as potential functional ingredients in food and nutraceuticals.

    abstract::Fungal bioactive polysaccharides deriving mainly from the Basidiomycetes family (and some from the Ascomycetes) and medicinal mushrooms have been well known and widely used in far Asia as part of traditional diet and medicine, and in the last decades have been the core of intense research for the understanding and the...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.01.010

    authors: Giavasis I

    更新日期:2014-04-01 00:00:00

  • Novel perspectives for the engineering of abiotic stress tolerance in plants.

    abstract::Adverse environmental conditions pose serious limitations to agricultural production. Classical biotechnological approaches towards increasing abiotic stress tolerance focus on boosting plant endogenous defence mechanisms. However, overexpression of regulatory elements or effectors is usually accompanied by growth han...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.09.011

    authors: Cabello JV,Lodeyro AF,Zurbriggen MD

    更新日期:2014-04-01 00:00:00

  • Flux analysis in plant metabolic networks: increasing throughput and coverage.

    abstract::Quantitative information about metabolic networks has been mainly obtained at the level of metabolite contents, transcript abundance, and enzyme activities. However, the active process of metabolism is represented by the flow of matter through the pathways. These metabolic fluxes can be predicted by Flux Balance Analy...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2014.01.016

    authors: Junker BH

    更新日期:2014-04-01 00:00:00

  • Human-on-chip for therapy development and fundamental science.

    abstract::Organ-on-chip systems integrate microfluidic technology and living cells to study human physiology and pathophysiology. These human in vitro models are promising substitutes for animal testing, and their small scale enables precise control of culture conditions and high-throughput experiments, which would not be econo...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.08.015

    authors: Luni C,Serena E,Elvassore N

    更新日期:2014-02-01 00:00:00

  • Current initiatives for the validation of analytical methods for botanicals.

    abstract::The demand for validated analytical methods for botanicals has grown in response to the increasing consumer market for botanical supplements. Government initiatives to increase the availability of validated analytical methods and botanical reference material have led to the publication of numerous validation studies i...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.10.003

    authors: Brown PN,Lister P

    更新日期:2014-02-01 00:00:00

  • The emerging CHO systems biology era: harnessing the 'omics revolution for biotechnology.

    abstract::Chinese hamster ovary (CHO) cells are the primary factories for biopharmaceuticals because of their capacity to correctly fold and post-translationally modify recombinant proteins compatible with humans. New opportunities are arising to enhance these cell factories, especially since the CHO-K1 cell line was recently s...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.02.007

    authors: Kildegaard HF,Baycin-Hizal D,Lewis NE,Betenbaugh MJ

    更新日期:2013-12-01 00:00:00

  • Tissue engineering and regenerative medicine as applied to the gastrointestinal tract.

    abstract::The gastrointestinal (GI) tract is a complex system characterized by multiple cell types with a determined architectural arrangement. Tissue engineering of the GI tract aims to reinstate the architecture and function of all structural layers. The key point for successful tissue regeneration includes the use of cells/b...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.03.021

    authors: Bitar KN,Zakhem E

    更新日期:2013-10-01 00:00:00

  • Engineering a local microenvironment for pancreatic islet replacement.

    abstract::Intraportal islet transplantation has emerged as a promising treatment for type 1 diabetes mellitus (T1DM). Nevertheless, long-term efficacy has been limited to a marginal number of patients. Outcomes have been restricted, in part, by challenges associated with the transplant site, poor vascularization, and disruption...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.05.004

    authors: Coronel MM,Stabler CL

    更新日期:2013-10-01 00:00:00

  • Engineering peripheral nerve repair.

    abstract::Current approaches for treating peripheral nerve injury have resulted in promising, yet insufficient functional recovery compared to the clinical standard of care, autologous nerve grafts. In order to design a construct that can match the regenerative potential of the autograft, all facets of nerve tissue must be inco...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.05.006

    authors: Marquardt LM,Sakiyama-Elbert SE

    更新日期:2013-10-01 00:00:00

  • Recent trends in nanopores for biotechnology.

    abstract::Nanopore technology employs a nanoscale hole in an insulating membrane to stochastically sense with high throughput individual biomolecules in solution. The generality of the nanopore detection principle and the ease of single-molecule detection suggest many potential applications of nanopores in biotechnology. Recent...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.11.008

    authors: Stoloff DH,Wanunu M

    更新日期:2013-08-01 00:00:00

  • DNA nanotechnology with one-dimensional self-assembled nanostructures.

    abstract::The information encoded in the base sequence of DNA provides substantial structural and functional information for the instructive self-assembly of one-dimensional (1D) functional DNA nanostructures. The hybridization chain reaction (HCR) and the formation of HCR-stimulated DNAzyme nanochains are presented, as a means...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.02.005

    authors: Wang F,Willner B,Willner I

    更新日期:2013-08-01 00:00:00

  • Engineering nanoscale protein compartments for synthetic organelles.

    abstract::Advances in metabolic engineering have given rise to the biological production of novel fuels and chemicals, but yields are often low without significant optimization. One generalizable solution is to create a specialized organelle for the sequestration of engineered metabolic pathways. Bacterial microcompartments are...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.11.012

    authors: Kim EY,Tullman-Ercek D

    更新日期:2013-08-01 00:00:00

  • The interplay between microevolution and community structure in microbial populations.

    abstract::The structure of microbial communities is key to their functionality. However, this structure is likely to be influenced by adaptive genetic change in members of the community, which can occur over a matter of days. Changes in community structure can in turn influence the evolutionary trajectories of species within th...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.02.022

    authors: O'Brien S,Hodgson DJ,Buckling A

    更新日期:2013-08-01 00:00:00

  • Predicting phenotypic variation from genotypes, phenotypes and a combination of the two.

    abstract::A central challenge for medicine is to predict disease risk and treatment outcomes for individuals. But what kind of information should be used to make useful predictions in biology? One important cause of phenotypic variation is of course genetics. However genetic predictions have both practical and fundamental limit...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.03.004

    authors: Burga A,Lehner B

    更新日期:2013-08-01 00:00:00

  • In situ treatment of PCBs by anaerobic microbial dechlorination in aquatic sediment: are we there yet?

    abstract::The remediation of polychlorinated biphenyls (PCBs) in soils and sediments remains a particularly difficult problem to solve. The possibility of in situ degradation by microorganisms has been pursued for many years since this approach has the potential to provide a cost-effective and environmentally sustainable altern...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.10.004

    authors: Sowers KR,May HD

    更新日期:2013-06-01 00:00:00

  • Advances in monitoring environmental microbes.

    abstract::Culture-independent approaches, such as next-generation sequencing and microarray-based tools, provide insight into the identity and functional diversity of microbial communities. Although these approaches are potentially powerful tools in understanding microbial structure and function, there are a number of limitatio...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2012.10.020

    authors: Hazen TC,Rocha AM,Techtmann SM

    更新日期:2013-06-01 00:00:00

  • Potential of industrial biotechnology with cyanobacteria and eukaryotic microalgae.

    abstract::Both cyanobacteria and eukaryotic microalgae are promising organisms for sustainable production of bulk products such as food, feed, materials, chemicals and fuels. In this review we will summarize the potential and current biotechnological developments. Cyanobacteria are promising host organisms for the production of...

    journal_title:Current opinion in biotechnology

    pub_type: 杂志文章,评审

    doi:10.1016/j.copbio.2013.04.004

    authors: Wijffels RH,Kruse O,Hellingwerf KJ

    更新日期:2013-06-01 00:00:00

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